Explore our new MERSCOPE FFPE Sample Prep Solution for high-quality spatial genomic analysis

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Vizgen is developing the next generation of genomics tools to expand on the capabilities of spatially resolved transcriptomics. Our technology will aide the acceleration of biological research and discovery to advance human health. Access supporting resources by selecting the category below.

User Guides

MERSCOPE Photobleacher User Guide

This guide outlines the instructions for use for the MERSCOPE Photobleacher. The MERSCOPE Photobleacher is used to remove autofluorescent background from tissue samples before performing MERFISH measurments on the MERSCOPETM Platform.

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User Guides

MERSCOPE Protein Stain Verification Kit User Guide

This user guide is intended to guide users through a protocol to verify that their (user-provided) primary antibodies are compatible with MERSCOPE Protein Stain Kits, and that sample preparation will result in adequate protein imaging…

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User Guides

Vizgen MERSCOPE Vizualizer Clustering Template

This notebook demonstrates how to use Scanpy to perform data pre-processing, dimensionality reduction, and single-cell Leiden clustering. This notebook is designed to take the Anndata output from the MERSCOPE Vizualizer and return a new Anndata…

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User Guides

Cultured Cells Sample Preparation

This user guide explains how to properly prepare cultured cell samples to run on the MERSCOPE instrument and includes the protocol, materials, and technical tips. 

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User Guides

Sample Verification Kit

This user guide explains how to verify that the RNA quality after sample preparation will result in adequate MERFISH imaging quality with the MERSCOPE Instrument. It includes the protocol, materials, and examples. 

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