This notebook demonstrates how to use Scanpy to perform data pre-processing, dimensionality reduction, and single-cell Leiden clustering. This notebook is designed to take the Anndata output from the MERSCOPE Vizualizer and return a new Anndata…
Vizgen is developing the next generation of genomics tools to expand on the capabilities of spatially resolved transcriptomics. Our technology will aide the acceleration of biological research and discovery to advance human health. Access supporting resources by selecting the category below.
This user guide explains how to properly prepare cultured cell samples to run on the MERSCOPE instrument and includes the protocol, materials, and technical tips.
This user guide explains how to verify that the RNA quality after sample preparation will result in adequate MERFISH imaging quality with the MERSCOPE Instrument. It includes the protocol, materials, and examples.
This user guide explains how to properly prepare fresh and fixed frozen tissue sections to run on the MERSCOPE instrument and includes the protocol, materials, and technical tips.
This user guide contains the information needed for setting up, running, maintaining, and troubleshooting Vizgen’s MERSCOPE instrument.