MERSCOPE Gene Panels

Accelerate spatial discovery with validated Pre-designed and Custom Panels, backed by MERFISH 2.0™ chemistry to deliver high-quality, reproducible results across diverse research applications.

MERSCOPE Pre-designed Panels with Add-on Capability

Accelerate Spatial Transcriptomics with Validated, Ready-to-Run Pre-designed Panels

MERSCOPE Pre-designed Panels, powered by MERFISH 2.0 chemistry, deliver fast, scalable spatial transcriptomics with fully validated gene panels for the MERSCOPE® and MERSCOPE Ultra™ Platforms. Designed for high sensitivity and reproducibility across both FFPE and fresh frozen tissues, these panels accelerate your path to high-quality biological insights. Expand any panel with up to 100 custom genes tailored to your specific research needs, without compromising performance or data quality.

Why Choose MERSCOPE Pre-designed Panels?

  • Start Experiments Sooner
  • Flexibility with Custom Add-on Panels
  • Drive Confident Insights
Explore MERSCOPE Pre-designed Panels

MERSCOPE Custom Panels for Up to 960 Genes

Tailor Custom Panels to Your Biological Questions and Discovery Goals

MERSCOPE Custom Panels, leveraging MERFISH 2.0 chemistry, unlock scalable, high-resolution spatial transcriptomics tailored to your research. Co-developed with Vizgen scientists, these panels precisely target the genes, pathways, and model systems that matter most. Fully compatible with the MERSCOPE and MERSCOPE Ultra Platforms, they deliver exceptional accuracy, reproducibility, and consistent performance across diverse sample types, so you can move faster from data to discovery.

Why choose MERSCOPE Custom Gene Panels?

  • Target the Genes That Matter Most
  • Adapt to Any Tissue, Species, or Model System
  • Optimize for High-Performance Spatial Transcriptomics
Visit the Gene Panel Design Portal

Flexible Gene Panels for Every Research Need

Oncology and Tumor Microenvironment

Characterize tumor heterogeneity, immune infiltration, and signaling pathways with single-cell spatial precision.

Neuroscience and Brain Mapping

Profile neuronal and glial cell populations, connectivity, and gene expression across defined brain regions.

Immunology and Inflammation

Visualize immune cell localization and cytokine signaling to reveal tissue-specific immune responses.

Developmental and Regenerative Biology

Trace spatial gene expression through differentiation or regeneration to uncover lineage relationships.

Organ and System-Level Profiling

Map cell types and molecular interactions in key organs, such as lung, liver, and kidney, with subcellular resolution.

Explore Our MERSCOPE Pre-designed Panels

Whether you’re running pilot studies or large-scale, multi-sample experiments, our flexible kit formats enable you to align experimental design with your research goals, timelines, and sample availability.

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Choose the Kit Size That Fits Your Study

MERSCOPE 815 Gene, V 2.0 Panels come in two sizes:

Small 4 Standard or 2 Large Slides
Large 10 Standard or 5 Large Slides

Mouse Panels

Spatial profiling of mouse tissues and biological systems for translational research

  • Pan Neuro
  • Pan Mouse
  • ImmunoOncology
  • Liver
  • Kidney
  • Cardiovascular
  • Lung
  • Transcription Factor A
  • Transcription Factor B

Human Biology Panels

Spatial profiling of human tissue biology, pathways and physiological systems

  • Brain
  • Human
  • Metabolic
  • Inflammation
  • Cardiovascular

Human Oncology Panels

Spatial profiling of tumor biology and microenvironment across human cancers, enabling comparison to healthy controls

  • ImmunoOncology
  • Breast Cancer
  • Colon Cancer
  • Lung Cancer
  • Liver Cancer
  • Kidney Cancer
  • Skin Cancer

Frequently Asked Questions

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