Data Release Program

MERSCOPE Protein Co-Detection Data Release

The dataset contains two MERFISH datasets from human FFPE uterine cancer tumor sample replicates, with a 500 gene panel focused on immuno-oncology. We combined protein staining for CD45RA and CD45RO, key immune cell markers involved in T-cell differentiation and activation, with MERFISH to provide a multi-dimensional view of the tumor microenvironment within FFPE human uterine cancer samples.

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MERSCOPE FFPE Human Immuno-oncology

The dataset contains 16 total datasets from 8 FFPE tumor tissue types including breast, colon, lung, liver, skin, prostate, uterine and ovarian, each measuring 500 genes totaling over 4 billion transcripts and 9 million cells cumulatively.

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Vizgen MERFISH Mouse Liver Map

This dataset contains a MERFISH measurement of a gene panel containing 347 total genes. The dataset includes the list of detected transcripts, gene counts per cell matrix, additional spatial cell metadata, cell boundary polygons, and DAPI images.

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Vizgen MERFISH Mouse Receptor Map

This dataset contains a MERFISH measurement of a gene panel containing 483 total genes including canonical brain cell type markers, GPCRs, and RTKs measured on 3 full coronal slices across 3 biological replicates. The dataset includes the list of detected transcripts, gene counts per cell matrix, additional spatial cell metadata, cell boundary polygons, and DAPI images

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The Vizgen Data Release Program allows researchers early access to MERFISH data generated on the MERSCOPE® Platform to enhance their research and better understand the unique advantages of highly multiplexed spatial RNA profiling with subcellular resolution and high detection efficiency.

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