Single-Cell Spatial Transcriptomics
Build high-resolution spatial RNA maps of complex tissue sections with MERFISH 2.0™ on MERSCOPE™ Ultra™ and analyze results using the supporting MERSCOPE Vizualizer software.
MERSCOPE Ultra Imaging Platform
High-throughput powered by MERFISH 2.0, delivering single-molecule sensitivity and subcellular resolution across fresh-frozen and FFPE. Run discovery-scale spatial transcriptomics with reproducible performance and streamlined workflows.
Gene Panels: Pre-designed & Custom
Choose ready-to-run gene panels or design custom gene panels tailored to your biological question. MERFISH 2.0 supports multiplexing of up to 1,000 genes and enables cell typing, cell state discovery, and pathway insight in spatial transcriptomics experiments.
Reagents & Consumables for Workflow
Validated kits for sample prep, staining, and imaging, optimized for FFPE and fresh-frozen tissue. Support optional protein co-detection and seamless runs on MERSCOPE Ultra, anchoring the spatial transcriptomics workflow end to end.
Vizualizer Software for Analysis
Interactive analysis for spatial transcriptomics: explore single-molecule RNA data in tissue context, review quality and cell-level results, and share figures. Integrated with upstream imaging and pipelines to support confident, end-to-end studies.
Spatial Transcriptomics Services
Accelerate projects with expert help: panel design, sample prep, imaging, and analysis support for spatial transcriptomics studies.
Vizgen Lab Services delivers high-resolution spatial transcriptomics powered by MERFISH 2.0 technology, generated on the MERSCOPE Ultra. Our expert team handles every step from tissue processing to data analysis, providing spatial maps of gene expression across intact tissue architecture to reveal cellular organization, interactions, and pathways driving biological discovery.
FAQ
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How do I start a MERFISH 2.0 study?
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Do I need to own an instrument to begin?
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How many genes can I multiplex, and how do I pick panels?
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Can I co-detect proteins alongside RNA?