22nd January 2024
22nd January 2024
Bento: A toolkit for subcellular analysis of spatial transcriptomics data
8th January 2024
MENDER: fast and scalable tissue structure identification in spatial omics data
13th December 2023
STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping
24th September 2023
Spatial-Live: A lightweight and versatile tool for single cell spatial-omics data visualization
22nd September 2023
Bering: joint cell segmentation and annotation for spatial transcriptomics with transferred graph embeddings
22nd September 2023
Monkeybread: A Python toolkit for the analysis of cellular niches in single-cell resolution spatial transcriptomics data
15th September 2023
Developmental Mouse Brain Common Coordinate Framework
8th September 2023
Accurate single-molecule spot detection for image-based spatial transcriptomics with weakly supervised deep learning
4th September 2023