19th February 2025

STAIG: Spatial transcriptomics analysis via image-aided graph contrastive learning for domain exploration and alignment-free integration

19th February 2025

Graph contrastive learning of subcellular-resolution spatial transcriptomics improves cell type annotation and reveals critical molecular pathways

19th February 2025

Long-range genomic loci stochastically assemble into combinatorial forms of chromosome skeleton

19th February 2025

scGPT-spatial: Continual Pretraining of Single-Cell Foundation Model for Spatial Transcriptomics

19th February 2025

Learning single-cell spatial context through integrated spatial multiomics with CORAL

19th February 2025

SpatialLeiden: spatially aware Leiden clustering

19th February 2025

CellSP: Module discovery and visualization for subcellular spatial transcriptomics data

19th February 2025

SpaIM: Single-cell Spatial Transcriptomics Imputation via Style Transfer

19th February 2025

sCCIgen: A high-fidelity spatially resolved transcriptomics data simulator for cell-cell interaction studies

19th February 2025

Accurate tiling of spatial single-cell data with Tessera

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